Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935371.1_cds_XP_016481205.1_72561
CDS Infomation

[gene=LOC107802255] [db_xref=GeneID:107802255] [protein=magnesium-chelatase subunit ChlH, chloroplastic] [protein_id=XP_016481205.1] [location=complement(join(14684..15061,15163..15639,15745..17547,18698..18780,18904..20311))] [gbkey=CDS]
Sequence

ATGGCTTCTTTGGTTTCTTCACCATTTACATTGCCAAATTCAAAAGTAGAACACTTGTCA
TCCATTTCTCAAAAGCATTACTTTCTTCACTCATTTCTTCCCAAGAAAATAAACCCCACT
TACTCAAAATCACCAAAGAAATTCCAATGTAATGCTATTGGCAATGGTTTATTCACTCAA
ACAACTCAAGAAGTTAGGAGAATTGTGCCTGAAAATACTCAGGGACTTGCTACTGTGAAA
ATAGTCTATGTTGTATTGGAAGCTCAGTACCAATCATCACTTACTGCTGCTGTTCAGACA
CTGAACAAGAATGGTCAGTTTGCTTCTTTTGAGGTTGTGGGGTACTTGGTTGAGGAGCTT
AGAGATGAGAATACTTATAAAATGTTTTGTAAAGATCTTGAGGATGCAAATGTGTTTATT
GGTTCATTGATTTTTGTGGAAGAATTGGCTTTAAAGGTAAAATCTGCAGTGGAGAAAGAA
AGGGACAGACTTGATGCAGTTTTGGTGTTTCCATCAATGCCTGAGGTGATGAGGTTGAAC
AAGTTGGGATCTTTTAGTATGTCACAATTGGGGCAATCAAAGAGTCCATTTTTTGAGCTT
TTCAAGAAGAAGAAACCTTCTTCTGCAGGTTTTTCTGATCAGATGTTGAAGCTTGTGAGA
ACATTGCCTAAGGTTTTGAAGTATTTACCAAGTGATAAAGCTCAAGATGCTAGGTTGTAC
ATACTAAGTTTGCAGTTTTGGCTAGGAGGTTCACCTGATAATTTGGTGAATTTCTTGAAA
ATGATTTCTGGTTCTTATGTTCCTGCTCTTAAAGGGATGAAAATCGACTACTCGGATCCG
GTTTTGTACTTGGATAATGGAATTTGGCACCCTTTGGCTCCTTGTATGTATGATGATGTG
AAGGAGTATTTGAATTGGTATGCAACAAGGAGAGATACTAATGAGAAACTCAAGAGTTCA
AATGCTCCTGTTGTTGGGCTGGTTTTGCAAAGGAGTCATATTGTTACTGGTGATGAGAGT
CACTATGTGGCTGTGATCATGGAATTGGAGGCAAAAGGGGCTAAAGTTATCCCAATTTTC
GCCGGTGGGCTAGACTTTTCGGGGCCAGTTGAGAGATATTTCATTGATCCTATTACAAAG
AAGCCTTTTGTGAATTCAGTAATATCACTTACTGGTTTTGCACTTGTTGGAGGGCCAGCA
AGACAAGACCATCCAAGGGCAATAGAGGCTTTGATGAAACTTGATGTGCCTTATATTGTG
GCATTGCCTTTGGTTTTCCAAACAACAGAGGAATGGTTGAACAGTACTTTGGGGCTGCAC
CCTATTCAGGTGGCTCTACAAGTTGCTCTCCCTGAGCTGGATGGAGGAATGGAGCCCATC
GTATTCGCCGGTCGCGATCCAAGAACAGGGAAATCACATGCTCTTCACAAAAGAGTGGAG
CAGCTTTGCACCAGGGCAATCAAATGGGGAGAGTTAAAGAGAAAAACAAAGGCTGAGAAG
AGGTTGGCAATCACTGTCTTCAGCTTTCCTCCAGACAAAGGCAATGTCGGAACTGCTGCA
TACTTGAATGTCTTTGCCTCCATATACTCTGTTCTCAAAGATCTCAAGAAAGACGGCTAC
AACGTTGAGGGGCTGCCTGAGACTTCTGCACAACTTATTGAAGAAGTAATTCACGACAAA
GAAGCTCAGTTCAGCAGCCCAAATCTTAACATAGCTTACAAGATGAATGTTAGAGAATAC
CAGAAGCTAACCCCCTATGCTACTGCTCTTGAAGAAAACTGGGGGAAAGCACCTGGTAAT
TTGAACTCTGATGGAGAAAACCTCTTGGTATATGGTAAACAGTACGGCAATGTCTTTATC
GGTGTTCAGCCCACGTTTGGATACGAGGGTGACCCGATGAGACTTCTGTTCTCCAAATCA
GCTAGCCCTCACCATGGTTTTGCTGCATACTATTCCTTTGTGGAGAAAATTTTCAAAGCT
GATGCAGTTCTCCACTTTGGTACTCATGGTTCTCTTGAGTTCATGCCAGGTAAACAGGTG
GGAATGAGCGATGCTTGTTTCCCTGATAGTCTCATTGGAAACATTCCCAATGTCTATTAC
TATGCAGCAAACAACCCATCTGAAGCAACTATTGCCAAACGAAGGAGTTATGCGAATACC
ATTAGCTACTTGACTCCTCCGGCTGAGAATGCTGGACTCTACAAGGGACTCAAGCAGCTC
AGTGAGCTCATTTCCTCATACCAATCTTTGAAAGACTCAGGCCGTGGCCAACAGATTGTG
AACTCTATCATCAGTACAGCTAGACAGTGTAATCTTGACAAGGATGTTGATCTTCCAGAA
GAAGGGGAGGAAATCTCGGCCAAAGAGCGTGACCTTGTGGTAGGAAAAGTATACTCTAAG
ATTATGGAGATCGAGTCTCGTCTTCTTCCGTGTGGACTTCACATCATTGGTGAACCTCCA
ACCGCGATGGAAGCAGTTGCTACTCTTGTCAATATTGCGGCATTGGACCGTCCTGAAGAG
GGTATTTCTGCCCTTCCATCTATATTGGCTGCGACGGTTGGAAGAAGCATTGAGGAGATT
TACAGAGGCAATGACCAGGGCATCTTACGAGATGTGGAGCTGCTCCGTCAAATTACTGAG
GCATCACGTGGAGCAATATCAGCATTTGTTGAACGTACGACAAACAACAAGGGTCAGGTT
GTGAATGTCAATGACAAGCTAACCTCAATCCTTGGTTTTGGTATAAATGAACCATGGATC
CAGTATTTGTCAAACACCCAATTTTACAGAGCTGATAGGGACAAGCTCAGAGTTCTATTC
CAGTTCTTGGGAGAGTGTCTGAAGCTAATTGTCGCTAACAACGAGGTGGGAAGCTTGAAA
CAGGCTCTAGAAGGGAAATATGTTGAACCAGGTCCAGGAGGGGATCCGATCAGAAACCCG
AAAGTTTTGCCTACTGGGAAAAACATCCATGCTTTGGACCCACAAGCTATTCCCACAATA
GCAGCAGTGCAGAGTGCCAAAATTGTTGTTGAAAGATTGTTGGAGAGGCAAAAGGCCGAC
AACGGGGGCAAGTACCCGGAGACTGTTGCTCTGGTTCTTTGGGGAACAGACAACATCAAG
ACCTATGGAGAGTCATTGGCACAGGTTATGTGGATGATTGGTGTTAGGCCAGTTACAGAC
TCGTTAGGACGGGTTAACCGGGTGGAACCTGTTAGCCTTGAAGAGCTTGGAAGGCCTAGA
GTTGATGTTGTTGTCAACTGCTCTGGGGTGTTCAGAGATCTCTTCATCAATCAGATGAAT
CTCCTTGACCGAGCAGTCAAGATGGTTGCAGAGCTCGACGAGCCAGAAGACCAAAACTAC
GTCAGGAAACATGCACTAGAACAAGCAAAAACACTCGGAGTTGATGTTCGTGAAGCTGCT
ACAAGGATCTTCTCAAATGCTTCAGGATCTTACTCCTCCAACATTAACCTTGCTGTTGAG
AATTCAACATGGAATGATGAGAAGCAACTTCAAGACATGTACTTGAGCCGAAAGTCATTT
GCATTTGACTGTGATGCCCCTGGTGTTGGCATGACTGAGAAGAGGAAAGTTTTTGAGATG
GCTCTTAGCACGGCTGATGCCACATTCCAGAACCTTGACTCATCAGAAATTTCACTCACA
GACGTGAGTCACTACTTCGATTCAGACCCAACCAACCTTGTGCAAAACCTCAGGAAAGAC
GGGAAGAAGCCTAGTGCATACATTGCTGACACCACTACTGCTAATGCTCAGGTACGTACG
TTGTCTGAGACTGTGAGGCTTGACGCAAGGACAAAGTTGTTGAACCCCAAGTGGTATGAA
GGCATGCTATCCACTGGCTACGAGGGTGTTCGTGAGATTGAGAAACGATTAACTAACACA
GTGGGGTGGAGTGCAACTTCAGGCCAAGTTGATAATTGGGTGTATGAAGAAGCCAACACA
ACCTTCATTCAAGATCAGGAGATGTTGAACAGGCTCATGAACACAAATCCAAATTCTTTC
AGGAAGTTGCTTCAGACATTCTTGGAAGCCAACGGGCGTGGATACTGGGAAACTTCTGCA
GAGAACATTGAGAAACTCAAGCAATTATACTCAGAAGTTGAAGACAAGATTGAGGGAATC
GATCGATAA

Peptide Sequence

PEP ID

XP_016481205.1
PEP Infomation

PREDICTED: magnesium-chelatase subunit ChlH, chloroplastic [Nicotiana tabacum]
Sequence

MASLVSSPFTLPNSKVEHLSSISQKHYFLHSFLPKKINPTYSKSPKKFQCNAIGNGLFTQ
TTQEVRRIVPENTQGLATVKIVYVVLEAQYQSSLTAAVQTLNKNGQFASFEVVGYLVEEL
RDENTYKMFCKDLEDANVFIGSLIFVEELALKVKSAVEKERDRLDAVLVFPSMPEVMRLN
KLGSFSMSQLGQSKSPFFELFKKKKPSSAGFSDQMLKLVRTLPKVLKYLPSDKAQDARLY
ILSLQFWLGGSPDNLVNFLKMISGSYVPALKGMKIDYSDPVLYLDNGIWHPLAPCMYDDV
KEYLNWYATRRDTNEKLKSSNAPVVGLVLQRSHIVTGDESHYVAVIMELEAKGAKVIPIF
AGGLDFSGPVERYFIDPITKKPFVNSVISLTGFALVGGPARQDHPRAIEALMKLDVPYIV
ALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFAGRDPRTGKSHALHKRVE
QLCTRAIKWGELKRKTKAEKRLAITVFSFPPDKGNVGTAAYLNVFASIYSVLKDLKKDGY
NVEGLPETSAQLIEEVIHDKEAQFSSPNLNIAYKMNVREYQKLTPYATALEENWGKAPGN
LNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKA
DAVLHFGTHGSLEFMPGKQVGMSDACFPDSLIGNIPNVYYYAANNPSEATIAKRRSYANT
ISYLTPPAENAGLYKGLKQLSELISSYQSLKDSGRGQQIVNSIISTARQCNLDKDVDLPE
EGEEISAKERDLVVGKVYSKIMEIESRLLPCGLHIIGEPPTAMEAVATLVNIAALDRPEE
GISALPSILAATVGRSIEEIYRGNDQGILRDVELLRQITEASRGAISAFVERTTNNKGQV
VNVNDKLTSILGFGINEPWIQYLSNTQFYRADRDKLRVLFQFLGECLKLIVANNEVGSLK
QALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTIAAVQSAKIVVERLLERQKAD
NGGKYPETVALVLWGTDNIKTYGESLAQVMWMIGVRPVTDSLGRVNRVEPVSLEELGRPR
VDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEDQNYVRKHALEQAKTLGVDVREAA
TRIFSNASGSYSSNINLAVENSTWNDEKQLQDMYLSRKSFAFDCDAPGVGMTEKRKVFEM
ALSTADATFQNLDSSEISLTDVSHYFDSDPTNLVQNLRKDGKKPSAYIADTTTANAQVRT
LSETVRLDARTKLLNPKWYEGMLSTGYEGVREIEKRLTNTVGWSATSGQVDNWVYEEANT
TFIQDQEMLNRLMNTNPNSFRKLLQTFLEANGRGYWETSAENIEKLKQLYSEVEDKIEGI
DR

Transcript Sequence

Gene sequence data has not been registered.